BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007F10SP1|AL425740
(822 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1509 1629 0.0
>3x_Contig1509
Length = 8584
Score = 1629 bits (822), Expect = 0.0
Identities = 822/822 (100%)
Strand = Plus / Minus
Query: 1 atcgttctgcatcaaatgcattctagtctttaatgtgatatagggatacgtggttcctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4519 atcgttctgcatcaaatgcattctagtctttaatgtgatatagggatacgtggttcctgt 4460
Query: 61 agctgctaatttacctatggcccccaacaagaatgcccaacttggactcaagactttttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4459 agctgctaatttacctatggcccccaacaagaatgcccaacttggactcaagactttttt 4400
Query: 121 cctttgtagtctcaaaacaaggttcttcaattgctcgtagacagtatactgaatgatagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4399 cctttgtagtctcaaaacaaggttcttcaattgctcgtagacagtatactgaatgatagg 4340
Query: 181 gtttgaaacaagaactaaagcaggcttcaacccattgagaagagtcaatggaccatctgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4339 gtttgaaacaagaactaaagcaggcttcaacccattgagaagagtcaatggaccatctgt 4280
Query: 241 cttcacaatgtctatgactgttcttaaggtcgaatggttgctcttagcaactgtcattct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4279 cttcacaatgtctatgactgttcttaaggtcgaatggttgctcttagcaactgtcattct 4220
Query: 301 ggtgttagcaacccaaattggattactggcaacagcagtcatcgaaccagcaatggtact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4219 ggtgttagcaacccaaattggattactggcaacagcagtcatcgaaccagcaatggtact 4160
Query: 361 ggccaggatcgactcccaagtacttaagtactgtttcgttgtcaatgttcttgcagtctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4159 ggccaggatcgactcccaagtacttaagtactgtttcgttgtcaatgttcttgcagtctt 4100
Query: 421 tgcgcaccattcgtagaaatagtaataaacgaaattagtcgtagccatcccgtagacagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4099 tgcgcaccattcgtagaaatagtaataaacgaaattagtcgtagccatcccgtagacagc 4040
Query: 481 actttccaaacctaaaaagtatccaatgataccattcttgttatagatctccttgatagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4039 actttccaaacctaaaaagtatccaatgataccattcttgttatagatctccttgatagt 3980
Query: 541 ctctagcttaggtctcgcctcgttttccttcgtttgaaggttagtggtgatggtgactaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3979 ctctagcttaggtctcgcctcgttttccttcgtttgaaggttagtggtgatggtgactaa 3920
Query: 601 agggtaggtcactgcgattgaagctgcaccacccaaagatccagcaatggcgtgcgctaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3919 agggtaggtcactgcgattgaagctgcaccacccaaagatccagcaatggcgtgcgctaa 3860
Query: 661 ttcatccacatcgttaggattaatttctgacatctcacaaatagctcatacacacttctg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3859 ttcatccacatcgttaggattaatttctgacatctcacaaatagctcatacacacttctg 3800
Query: 721 ggatggtcttgcgagcgatgacttactgcgactcactgtgaatcagagtatggaatcttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3799 ggatggtcttgcgagcgatgacttactgcgactcactgtgaatcagagtatggaatcttt 3740
Query: 781 ttttcaaaattacataaatgttattatttcacatctttaaaa 822
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3739 ttttcaaaattacataaatgttattatttcacatctttaaaa 3698
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5640
Number of Sequences: 1807
Number of extensions: 5640
Number of successful extensions: 38
Number of sequences better than 1.0e-20: 1
length of query: 822
length of database: 10,358,551
effective HSP length: 16
effective length of query: 806
effective length of database: 10,329,639
effective search space: 8325689034
effective search space used: 8325689034
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)